Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs2260297 chr13:114174283 A/G 8.19E-5 288 25.53 28.17 12.57 KM Plot
KIRP rs2260303 chr13:114174575 T/C 8.19E-5 288 25.53 28.17 12.57 KM Plot
KIRP rs2260334 chr13:114175004 A/G 8.31E-5 289 12.57 27.1 25.65 KM Plot
KIRP rs2260377 chr13:114176028 A/T 7.83E-5 289 25.57 28.17 12.57 KM Plot
KIRP rs2260382 chr13:114176365 C/T 7.83E-5 289 25.57 28.17 12.57 KM Plot
KIRP rs2260780 chr10:134156016 C/T 0.000124 284 26.37 23.63 5.67 KM Plot
KIRP rs2261891 chr13:114174755 A/T 7.83E-5 289 25.57 28.17 12.57 KM Plot
KIRP rs2265140 chr13:114175358 T/C 7.83E-5 289 25.57 28.17 12.57 KM Plot
KIRP rs2268975 chr14:69419976 G/A 4.62E-5 275 26.1 26.63 6.1 KM Plot
KIRP rs2271907 chr10:75011942 G/C 7.33E-15 289 26.4 20.47 5.6 KM Plot
KIRP rs2271908 chr10:75012122 A/G 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs2272225 chr7:96309021 A/G 0 289 7.67 20.53 26.1 KM Plot
KIRP rs2276109 chr11:102745791 T/C 8.72E-6 288 25.7 26.52 10.97 KM Plot
KIRP rs2281736 chr20:60585609 C/T 0.000152 277 25.55 30.9 10.47 KM Plot
KIRP rs2291756 chr6:170462124 G/A 5.19E-5 276 25.55 26.77 20.53 KM Plot